Ensembl ID ENSG00000124380 Gene ID 11017 Accession 30240
Gene Symbol SNRNP27 Alias 27K;RY1 Full Name small nuclear ribonucleoprotein U4/U6.U5 subunit 27
Position 2 : 69893956 - 69905575 Length 11620 bases Strand Plus strand
Status Confidence Main interacting RNAssnRNARBP type Non-canonical_RBPs
Summary This gene encodes a serine/arginine-rich (SR) protein. SR proteins play important roles in pre-mRNA splicing by facilitating the recognition and selection of splice sites. The encoded protein associates with the 25S U4/U6.U5 tri-snRNP, a major component of the U2-type spiceosome. The expression of this gene may be altered in cells infected with the human T-cell lymphotropic virus type 1 (HTLV-1) retrovirus. A pseudogene of this gene is located on the long arm of chromosome 5. Alternatively spliced transcript variants have been observed for this gene. [provided by RefSeq, Feb 2011]

ENSG00000124380 Expression In 33 Tumors

Ensembl ID Gene symbol Log2 Foldchange Pvaue Cancer
Ensembl ID Gene symbol Cancer types Pubmed ID
ENSG00000124380 SNRNP27 tumor 22357164
ENSG00000124380 SNRNP27 tumors 22695170
ENSG00000124380 SNRNP27 breast cancer 24704585
ENSG00000124380 SNRNP27 lung tumors 25909283
ENSG00000124380 SNRNP27 tumors 26059414
ENSG00000124380 SNRNP27 breast cancers 26550991
ENSG00000124380 SNRNP27 tumors 26786290
ENSG00000124380 SNRNP27 GBM 27382437
ENSG00000124380 SNRNP27 tumor 31235759
ENSG00000124380 SNRNP27 GBMs 31611911
Ensembl ID Gene symbol Disease/phenotype Mutation type Mutated / Total samples Literature
Ensembl ID Gene symbol Cancer P-value Which worse show
ENSG00000124380 SNRNP27 UCEC 0.00023 high
ENSG00000124380 SNRNP27 ACC 0.0066 high
ENSG00000124380 SNRNP27 LGG 0.011 low
ENSG00000124380 SNRNP27 HNSC 0.0028 high
ENSG00000124380 SNRNP27 KIRP 0.00093 low
ENSG00000124380 SNRNP27 KICH 0.0028 high
ENSG00000124380 SNRNP27 LUAD 0.019 high
ENSG00000124380 SNRNP27 THYM 0.034 low
ENSG00000124380 SNRNP27 ESCA 0.0054 high
ENSG00000124380 SNRNP27 OV 0.014 low
ENSG00000124380 SNRNP27 KIRC 0.0032 low
ENSG00000124380 SNRNP27 LAML 0.021 high
ENSG00000124380 SNRNP27 SKCM 0.00019 low
ENSG00000124380 SNRNP27 LIHC 0.00056 high
Ensembl ID Gene symbol Cancer CNV type -log10(q-value) G-score average amplitude frequency