Ensembl ID
ENSG00000103449
Gene ID
6299
Accession
10524
Gene Symbol
SALL1
Alias
TBS;HSAL1;Sal-1;ZNF794;HEL-S-89
Full Name
spalt like transcription factor 1
Position
16 : 51135982 - 51152334
Length
16353 bases
Strand
Minus strand
Status
Confidence
Main interacting RNAs N.A. RBP type
Canonical_RBPs
Summary
The protein encoded by this gene is a zinc finger transcriptional repressor and may be part of the NuRD histone deacetylase complex (HDAC). Defects in this gene are a cause of Townes-Brocks syndrome (TBS) as well as bronchio-oto-renal syndrome (BOR). Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]
ENSG00000103449 Expression In 33 Tumors
Ensembl ID
Gene symbol
Log2 Foldchange
Pvaue
Cancer
ENSG00000103449
SALL1
-0.7
5.76e-13
KIRC
ENSG00000103449
SALL1
5.62
1.81e-40
LUSC
ENSG00000103449
SALL1
-0.9
2.26e-11
LIHC
ENSG00000103449
SALL1
5.69
2.78e-32
LUAD
Ensembl ID
Gene symbol
Cancer types
Pubmed ID
ENSG00000103449
SALL1
trophoblast tumors
12065233
ENSG00000103449
SALL1
tumours
20205715
ENSG00000103449
SALL1
tumor
23505351
ENSG00000103449
SALL1
breast cancer
24292671
ENSG00000103449
SALL1
breast cancer
25774687
ENSG00000103449
SALL1
cancers
28957656
ENSG00000103449
SALL1
acute myeloid leukemia (AML)
29484122
ENSG00000103449
SALL1
tumors
29581773
ENSG00000103449
SALL1
tumor
29625565
ENSG00000103449
SALL1
tumor
30031117
ENSG00000103449
SALL1
tumor
30233644
ENSG00000103449
SALL1
tumor
30237858
ENSG00000103449
SALL1
cancer
30590055
ENSG00000103449
SALL1
tumors
31040265
ENSG00000103449
SALL1
prostate cancer
31693770
ENSG00000103449
SALL1
tumors
6659476
Ensembl ID
Gene symbol
Disease/phenotype
Mutation type
Mutated / Total samples
Literature
Ensembl ID
Gene symbol
Cancer
P-value
Which worse
show
ENSG00000103449
SALL1
MESO
0.01
high
show
ENSG00000103449
SALL1
SARC
0.0062
high
show
ENSG00000103449
SALL1
UVM
0.0038
high
show
ENSG00000103449
SALL1
UCEC
0.00029
low
show
ENSG00000103449
SALL1
THCA
0.025
low
show
ENSG00000103449
SALL1
ACC
0.034
high
show
ENSG00000103449
SALL1
READ
0.0042
low
show
ENSG00000103449
SALL1
KIRP
0.018
low
show
ENSG00000103449
SALL1
KICH
0.0077
low
show
ENSG00000103449
SALL1
LUAD
0.0089
high
show
ENSG00000103449
SALL1
PCPG
0.021
low
show
ENSG00000103449
SALL1
COAD
0.00031
low
show
ENSG00000103449
SALL1
UCS
0.047
low
show
ENSG00000103449
SALL1
LAML
0.031
low
show
ENSG00000103449
SALL1
GBM
0.0022
low
show
ENSG00000103449
SALL1
LIHC
0.0096
low
show
Ensembl ID
Gene symbol
Cancer
CNV type
-log10(q-value)
G-score
average amplitude
frequency
ENSG00000103449
SALL1
CESC
Del
0.892712
0.071198
0.501561
0.183051
ENSG00000103449
SALL1
COAD
Amp
0.729036
0.067844
0.485324
0.246120
ENSG00000103449
SALL1
SARC
Del
0.749639
0.121745
0.554654
0.525292
ENSG00000103449
SALL1
SKCM
Del
0.771791
0.067555
0.489432
0.326975
ENSG00000103449
SALL1
PRAD
Del
0.888126
0.074597
0.505605
0.217480
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