Ensembl ID ENSG00000101391 Gene ID 51654 Accession 15880
Gene Symbol CDK5RAP1 Alias C42;CGI-05;HSPC167;C20orf34 Full Name CDK5 regulatory subunit associated protein 1
Position 20 : 33358839 - 33401561 Length 42723 bases Strand Minus strand
Status Confidence Main interacting RNAstRNARBP type Non-canonical_RBPs
Summary This gene encodes a regulator of cyclin-dependent kinase 5 activity. This protein has also been reported to modify RNA by adding a methylthio-group and may thus have a dual function as an RNA methylthiotransferase and as an inhibitor of cyclin-dependent kinase 5 activity. Alternative splicing results in multiple transcript variants that encode different isoforms. [provided by RefSeq, May 2013]

ENSG00000101391 Expression In 33 Tumors

Ensembl ID Gene symbol Log2 Foldchange Pvaue Cancer
ENSG00000101391 CDK5RAP1 0.40 1.86e-19 BRCA
ENSG00000101391 CDK5RAP1 1.03 3.04e-33 COAD
ENSG00000101391 CDK5RAP1 0.68 1.18e-20 KICH
ENSG00000101391 CDK5RAP1 1.20 5.10e-15 READ
ENSG00000101391 CDK5RAP1 0.54 1.50e-13 LUSC
ENSG00000101391 CDK5RAP1 0.47 1.62e-15 LIHC
ENSG00000101391 CDK5RAP1 0.65 3.07e-13 STAD
ENSG00000101391 CDK5RAP1 0.61 4.30e-22 LUAD
Ensembl ID Gene symbol Cancer types Pubmed ID
ENSG00000101391 CDK5RAP1 tumors 19083478
ENSG00000101391 CDK5RAP1 breast cancer 25607831
ENSG00000101391 CDK5RAP1 cancer 29552116
ENSG00000101391 CDK5RAP1 brain tumors 31654853
Ensembl ID Gene symbol Disease/phenotype Mutation type Mutated / Total samples Literature
Ensembl ID Gene symbol Cancer P-value Which worse show
ENSG00000101391 CDK5RAP1 MESO 0.0086 high
ENSG00000101391 CDK5RAP1 UVM 0.0011 high
ENSG00000101391 CDK5RAP1 PAAD 0.0045 low
ENSG00000101391 CDK5RAP1 UCEC 0.00012 high
ENSG00000101391 CDK5RAP1 LGG 0.00021 high
ENSG00000101391 CDK5RAP1 READ 0.00092 high
ENSG00000101391 CDK5RAP1 KICH 0.011 high
ENSG00000101391 CDK5RAP1 LUAD 0.031 low
ENSG00000101391 CDK5RAP1 PCPG 0.00028 low
ENSG00000101391 CDK5RAP1 THYM 1e-04 low
ENSG00000101391 CDK5RAP1 BRCA 0.0049 low
ENSG00000101391 CDK5RAP1 ESCA 0.0029 high
ENSG00000101391 CDK5RAP1 PRAD 0.015 high
Ensembl ID Gene symbol Cancer CNV type -log10(q-value) G-score average amplitude frequency
ENSG00000101391 CDK5RAP1 LUSC Amp 1.450029 0.219244 0.517567 0.588822
ENSG00000101391 CDK5RAP1 CESC Amp 2.964236 0.210575 0.711531 0.444068
ENSG00000101391 CDK5RAP1 READ Amp 19.108482 0.651629 1.292431 0.884848
ENSG00000101391 CDK5RAP1 COAD Amp 31.078319 0.419720 1.151473 0.713969
ENSG00000101391 CDK5RAP1 UCS Amp 1.656785 0.642253 0.831173 0.767857
ENSG00000101391 CDK5RAP1 HNSC Amp 3.757593 0.182181 0.572868 0.440613
ENSG00000101391 CDK5RAP1 BLCA Amp 2.835663 0.234539 0.576127 0.622549