Ensembl ID ENSG00000100836 Gene ID 8106 Accession 8565
Gene Symbol PABPN1 Alias OPMD;PAB2;PABII;PABP2;PABP-2 Full Name poly(A) binding protein nuclear 1
Position 14 : 23321457 - 23326163 Length 4707 bases Strand Plus strand
Status Confidence Main interacting RNAsmRNARBP type Canonical_RBPs
Summary This gene encodes an abundant nuclear protein that binds with high affinity to nascent poly(A) tails. The protein is required for progressive and efficient polymerization of poly(A) tails at the 3' ends of eukaryotic transcripts and controls the size of the poly(A) tail to about 250 nt. At steady-state, this protein is localized in the nucleus whereas a different poly(A) binding protein is localized in the cytoplasm. This gene contains a GCG trinucleotide repeat at the 5' end of the coding region, and expansion of this repeat from the normal 6 copies to 8-13 copies leads to autosomal dominant oculopharyngeal muscular dystrophy (OPMD) disease. Related pseudogenes have been identified on chromosomes 19 and X. Read-through transcription also exists between this gene and the neighboring upstream BCL2-like 2 (BCL2L2) gene. [provided by RefSeq, Dec 2010]

ENSG00000100836 Expression In 33 Tumors

Ensembl ID Gene symbol Log2 Foldchange Pvaue Cancer
ENSG00000100836 PABPN1 0.44 3.10e-14 BRCA
ENSG00000100836 PABPN1 0.66 2.33e-14 LUSC
ENSG00000100836 PABPN1 0.56 1.58e-12 LUAD
Ensembl ID Gene symbol Cancer types Pubmed ID
ENSG00000100836 PABPN1 tumors 19554630
ENSG00000100836 PABPN1 non-small cell lung cancer 24975429
ENSG00000100836 PABPN1 cancer 29106591
ENSG00000100836 PABPN1 bladder cancer 30818082
Ensembl ID Gene symbol Disease/phenotype Mutation type Mutated / Total samples Literature
Ensembl ID Gene symbol Cancer P-value Which worse show
ENSG00000100836 PABPN1 MESO 0.014 low
ENSG00000100836 PABPN1 SARC 0.017 high
ENSG00000100836 PABPN1 STAD 0.038 low
ENSG00000100836 PABPN1 PAAD 0.0014 low
ENSG00000100836 PABPN1 UCEC 0.023 high
ENSG00000100836 PABPN1 LGG 0.0052 low
ENSG00000100836 PABPN1 LUSC 0.0043 low
ENSG00000100836 PABPN1 KICH 0.006 high
ENSG00000100836 PABPN1 PCPG 0.014 high
ENSG00000100836 PABPN1 THYM 0.0012 low
ENSG00000100836 PABPN1 BRCA 0.0021 low
ENSG00000100836 PABPN1 COAD 0.034 high
ENSG00000100836 PABPN1 ESCA 2e-04 high
ENSG00000100836 PABPN1 OV 0.0047 low
ENSG00000100836 PABPN1 DLBC 0.044 low
ENSG00000100836 PABPN1 TGCT 0.014 low
ENSG00000100836 PABPN1 BLCA 0.0053 low
ENSG00000100836 PABPN1 GBM 0.045 low
ENSG00000100836 PABPN1 SKCM 0.0012 low
ENSG00000100836 PABPN1 CESC 0.023 low
ENSG00000100836 PABPN1 LIHC 0.00095 high
Ensembl ID Gene symbol Cancer CNV type -log10(q-value) G-score average amplitude frequency
ENSG00000100836 PABPN1 LUSC Del 0.652338 0.064613 0.360856 0.341317
ENSG00000100836 PABPN1 LUAD Amp 3.368468 0.176088 0.480933 0.329457
ENSG00000100836 PABPN1 ACC Amp 0.937307 0.277343 1.097570 0.300000
ENSG00000100836 PABPN1 READ Del 0.637830 0.068896 0.485108 0.412121
ENSG00000100836 PABPN1 GBM Del 4.580212 0.089314 0.601949 0.298094
ENSG00000100836 PABPN1 HNSC Del 1.727852 0.065747 0.427155 0.143678