Ensembl ID ENSG00000100138 Gene ID 4809 Accession 7819
Gene Symbol SNU13 Alias FA1;FA-1;NHPX;15.5K;OTK27;SSFA1;NHP2L1;SPAG12;SNRNP15-5 Full Name small nuclear ribonucleoprotein 13
Position 22 : 41673933 - 41690504 Length 16572 bases Strand Minus strand
Status Confidence Main interacting RNAssnRNARBP type Canonical_RBPs
Summary Originally named because of its sequence similarity to the Saccharomyces cerevisiae NHP2 (non-histone protein 2), this protein appears to be a highly conserved nuclear protein that is a component of the [U4/U6.U5] tri-snRNP. It binds to the 5' stem-loop of U4 snRNA. Two transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Jul 2008]

ENSG00000100138 Expression In 33 Tumors

Ensembl ID Gene symbol Log2 Foldchange Pvaue Cancer
Ensembl ID Gene symbol Cancer types Pubmed ID
ENSG00000100138 SNU13 AML 28103300
ENSG00000100138 SNU13 GBM 30671385
ENSG00000100138 SNU13 cancer 31712650
Ensembl ID Gene symbol Disease/phenotype Mutation type Mutated / Total samples Literature
Ensembl ID Gene symbol Cancer P-value Which worse show
ENSG00000100138 SNU13 UVM 0.0027 high
ENSG00000100138 SNU13 PAAD 0.016 low
ENSG00000100138 SNU13 UCEC 0.0036 low
ENSG00000100138 SNU13 ACC 0.0013 high
ENSG00000100138 SNU13 LUSC 0.035 low
ENSG00000100138 SNU13 HNSC 0.042 high
ENSG00000100138 SNU13 READ 0.012 low
ENSG00000100138 SNU13 KIRP 0.016 high
ENSG00000100138 SNU13 KICH 0.0012 high
ENSG00000100138 SNU13 PCPG 0.00019 low
ENSG00000100138 SNU13 COAD 0.014 high
ENSG00000100138 SNU13 ESCA 0.016 low
ENSG00000100138 SNU13 OV 0.0015 low
ENSG00000100138 SNU13 DLBC 0.0091 low
ENSG00000100138 SNU13 KIRC 0.02 high
ENSG00000100138 SNU13 LAML 0.0037 high
ENSG00000100138 SNU13 CESC 0.044 low
ENSG00000100138 SNU13 LIHC 0.0053 high
Ensembl ID Gene symbol Cancer CNV type -log10(q-value) G-score average amplitude frequency
ENSG00000100138 SNU13 CESC Del 0.621722 0.064959 0.383713 0.277966
ENSG00000100138 SNU13 UCS Del 0.998883 0.228130 0.605628 0.642857
ENSG00000100138 SNU13 GBM Del 1.301802 0.059668 0.585383 0.348354
ENSG00000100138 SNU13 SKCM Amp 4.878962 0.239208 0.645128 0.395095
ENSG00000100138 SNU13 PCPG Del 0.823171 0.060816 0.620828 0.401235
ENSG00000100138 SNU13 BLCA Del 1.054638 0.083587 0.366933 0.450980
ENSG00000100138 SNU13 UCEC Del 2.192827 0.065280 0.563077 0.233766
ENSG00000100138 SNU13 OV Del 5.911551 0.257480 0.656119 0.839378