Ensembl ID ENSG00000088038 Gene ID 4849 Accession 7879
Gene Symbol CNOT3 Alias NOT3;LENG2;NOT3H;IDDSADF Full Name CCR4-NOT transcription complex subunit 3
Position 19 : 54137749 - 54155681 Length 17933 bases Strand Plus strand
Status Confidence Main interacting RNAsmRNARBP type Canonical_RBPs
Summary Involved in regulation of stem cell population maintenance. Part of CCR4-NOT complex. [provided by Alliance of Genome Resources, Apr 2022]

ENSG00000088038 Expression In 33 Tumors

Ensembl ID Gene symbol Log2 Foldchange Pvaue Cancer
ENSG00000088038 CNOT3 0.36 6.01e-11 HNSC
ENSG00000088038 CNOT3 0.58 5.20e-39 BRCA
ENSG00000088038 CNOT3 0.73 2.47e-21 LUSC
ENSG00000088038 CNOT3 0.52 2.32e-16 LIHC
Ensembl ID Gene symbol Cancer types Pubmed ID
ENSG00000088038 CNOT3 tumor 12695554
ENSG00000088038 CNOT3 tumors 23263491
ENSG00000088038 CNOT3 Colorectal Cancer 27899379
ENSG00000088038 CNOT3 tumor 28157215
ENSG00000088038 CNOT3 tumor 28588606
ENSG00000088038 CNOT3 tumor 30144809
ENSG00000088038 CNOT3 non-small cell lung cancer 30531840
ENSG00000088038 CNOT3 tumor 30809292
ENSG00000088038 CNOT3 lung cancer 31177396
ENSG00000088038 CNOT3 cancers 31231471
ENSG00000088038 CNOT3 tumour 31572192
Ensembl ID Gene symbol Disease/phenotype Mutation type Mutated / Total samples Literature
ENSG00000088038 CNOT3 T-cell acute lymphoblastic leukemia frameshift_variant 3.95% (35/886) 3 entries
ENSG00000088038 CNOT3 T-cell acute lymphoblastic leukemia sequence_alteration 3.95% (35/886) 4 entries
ENSG00000088038 CNOT3 colorectal adenocarcinoma missense_variant 3.779% (43/1138) 2 entries
ENSG00000088038 CNOT3 colorectal adenocarcinoma frameshift_variant 3.779% (43/1138) 1 entry
ENSG00000088038 CNOT3 T-cell acute lymphoblastic leukemia missense_variant 3.95% (35/886) 4 entries
ENSG00000088038 CNOT3 colorectal adenocarcinoma sequence_alteration 3.779% (43/1138) 2 entries
ENSG00000088038 CNOT3 T-cell acute lymphoblastic leukemia stop_gained 3.95% (35/886) 3 entries
ENSG00000088038 CNOT3 melanoma missense_variant 4.95% (5/101) 1 entry
ENSG00000088038 CNOT3 T-cell acute lymphoblastic leukemia amino_acid_insertion 3.95% (35/886) 1 entry
ENSG00000088038 CNOT3 oral squamous cell carcinoma missense_variant 1.456% (3/206) 3 entries
ENSG00000088038 CNOT3 colonic neoplasm missense_variant 13.33% (2/15) 1 entry
ENSG00000088038 CNOT3 colon adenocarcinoma missense_variant 1.524% (11/722) 4 entries
ENSG00000088038 CNOT3 prostate adenocarcinoma missense_variant 0.9622% (14/1455) 2 entries
ENSG00000088038 CNOT3 chronic lymphocytic leukemia sequence_alteration 1.319% (12/910) 2 entries
ENSG00000088038 CNOT3 ovarian serous adenocarcinoma missense_variant 0.2972% (2/673) 1 entry
ENSG00000088038 CNOT3 lung adenocarcinoma missense_variant 0.6879% (8/1163) 2 entries
ENSG00000088038 CNOT3 esophageal adenocarcinoma missense_variant 1.37% (6/438) 1 entry
ENSG00000088038 CNOT3 pancreatic ductal adenocarcinoma sequence_alteration 0.9531% (12/1259) 1 entry
ENSG00000088038 CNOT3 esophageal adenocarcinoma sequence_alteration 1.37% (6/438) 1 entry
ENSG00000088038 CNOT3 prostate adenocarcinoma sequence_alteration 0.9622% (14/1455) 1 entry
ENSG00000088038 CNOT3 prostate carcinoma missense_variant 1.878% (8/426) 2 entries
ENSG00000088038 CNOT3 esophageal squamous cell carcinoma missense_variant 0.5926% (4/675) 2 entries
ENSG00000088038 CNOT3 basal cell carcinoma missense_variant 6.897% (4/58) 1 entry
ENSG00000088038 CNOT3 hepatocellular carcinoma missense_variant 0.5543% (5/902) 1 entry
ENSG00000088038 CNOT3 cecum adenocarcinoma missense_variant 1.6% (2/125) 1 entry
ENSG00000088038 CNOT3 lung adenocarcinoma sequence_alteration 0.6879% (8/1163) 2 entries
ENSG00000088038 CNOT3 ovarian serous adenocarcinoma sequence_alteration 0.2972% (2/673) 1 entry
ENSG00000088038 CNOT3 chronic lymphocytic leukemia missense_variant 1.319% (12/910) 4 entries
ENSG00000088038 CNOT3 skin melanoma missense_variant 0.9307% (9/967) 1 entry
ENSG00000088038 CNOT3 colon adenocarcinoma frameshift_variant 1.524% (11/722) 1 entry
ENSG00000088038 CNOT3 melanoma frameshift_variant 4.95% (5/101) 2 entries
ENSG00000088038 CNOT3 melanoma conservative_inframe_deletion 4.95% (5/101) 1 entry
ENSG00000088038 CNOT3 oral squamous cell carcinoma sequence_alteration 1.456% (3/206) 1 entry
ENSG00000088038 CNOT3 diffuse gastric adenocarcinoma missense_variant 1.266% (1/79) 1 entry
ENSG00000088038 CNOT3 pancreatic ductal adenocarcinoma missense_variant 0.9531% (12/1259) 1 entry
ENSG00000088038 CNOT3 diffuse large B-cell lymphoma missense_variant 0.3289% (1/304) 1 entry
ENSG00000088038 CNOT3 non-small cell lung carcinoma frameshift_variant 1.887% (1/53) 1 entry
ENSG00000088038 CNOT3 bile duct adenocarcinoma sequence_alteration 0.5291% (1/189) 1 entry
ENSG00000088038 CNOT3 HER2 Positive Breast Carcinoma missense_variant 1.852% (2/108) 1 entry
ENSG00000088038 CNOT3 clear cell renal carcinoma sequence_alteration 0.3255% (4/1229) 1 entry
ENSG00000088038 CNOT3 colon adenocarcinoma sequence_alteration 1.524% (11/722) 1 entry
ENSG00000088038 CNOT3 cecum adenocarcinoma sequence_alteration 1.6% (2/125) 1 entry
ENSG00000088038 CNOT3 prostate adenocarcinoma stop_gained 0.9622% (14/1455) 1 entry
ENSG00000088038 CNOT3 bile duct adenocarcinoma missense_variant 0.5291% (1/189) 1 entry
ENSG00000088038 CNOT3 breast ductal adenocarcinoma missense_variant 2.055% (12/584) 1 entry
ENSG00000088038 CNOT3 Ampulla of Vater Carcinoma missense_variant 1.176% (1/85) 1 entry
ENSG00000088038 CNOT3 breast phyllodes tumor missense_variant 4.545% (1/22) 1 entry
ENSG00000088038 CNOT3 female breast carcinoma missense_variant 0.3745% (1/267) 1 entry
ENSG00000088038 CNOT3 small cell lung carcinoma sequence_alteration 0.3155% (1/317) 1 entry
ENSG00000088038 CNOT3 B-cell acute lymphoblastic leukemia sequence_alteration 1.852% (1/54) 1 entry
ENSG00000088038 CNOT3 dedifferentiated chondrosarcoma missense_variant 7.692% (1/13) 1 entry
ENSG00000088038 CNOT3 esophageal squamous cell carcinoma sequence_alteration 0.5926% (4/675) 1 entry
ENSG00000088038 CNOT3 Merkel cell skin cancer sequence_alteration 3.333% (1/30) 1 entry
ENSG00000088038 CNOT3 bone osteosarcoma missense_variant 33.33% (1/3) 1 entry
ENSG00000088038 CNOT3 diffuse gastric adenocarcinoma sequence_alteration 1.266% (1/79) 1 entry
ENSG00000088038 CNOT3 dedifferentiated chondrosarcoma sequence_alteration 7.692% (1/13) 1 entry
ENSG00000088038 CNOT3 Ampulla of Vater Carcinoma sequence_alteration 1.176% (1/85) 1 entry
ENSG00000088038 CNOT3 Gallbladder Adenocarcinoma sequence_alteration 1.149% (1/87) 1 entry
ENSG00000088038 CNOT3 B-cell acute lymphoblastic leukemia missense_variant 1.852% (1/54) 1 entry
Ensembl ID Gene symbol Cancer P-value Which worse show
ENSG00000088038 CNOT3 MESO 0.0033 high
ENSG00000088038 CNOT3 SARC 0.0093 high
ENSG00000088038 CNOT3 UVM 0.013 high
ENSG00000088038 CNOT3 PAAD 0.0072 low
ENSG00000088038 CNOT3 KIRP 0.0024 high
ENSG00000088038 CNOT3 LUAD 0.026 high
ENSG00000088038 CNOT3 PCPG 0.028 high
ENSG00000088038 CNOT3 THYM 0.031 low
ENSG00000088038 CNOT3 BRCA 0.027 low
ENSG00000088038 CNOT3 COAD 0.00058 high
ENSG00000088038 CNOT3 OV 0.035 high
ENSG00000088038 CNOT3 PRAD 0.021 low
ENSG00000088038 CNOT3 BLCA 0.025 low
ENSG00000088038 CNOT3 LAML 0.05 high
ENSG00000088038 CNOT3 GBM 0.038 low
ENSG00000088038 CNOT3 SKCM 0.00068 high
ENSG00000088038 CNOT3 CESC 0.0073 high
Ensembl ID Gene symbol Cancer CNV type -log10(q-value) G-score average amplitude frequency
ENSG00000088038 CNOT3 LUSC Del 2.554559 0.089464 0.370984 0.255489
ENSG00000088038 CNOT3 LUAD Del 1.031696 0.056021 0.316807 0.337209
ENSG00000088038 CNOT3 LGG Del 24.881636 0.173899 0.664985 0.530214
ENSG00000088038 CNOT3 CESC Amp 0.871705 0.135263 0.586661 0.315254
ENSG00000088038 CNOT3 SARC Del 2.319264 0.164293 0.427874 0.319066
ENSG00000088038 CNOT3 GBM Del 7.904043 0.112393 0.520658 0.145581
ENSG00000088038 CNOT3 TGCT Del 1.074585 0.064959 0.340103 0.380000
ENSG00000088038 CNOT3 BLCA Amp 1.137569 0.180607 0.471518 0.394608
ENSG00000088038 CNOT3 BRCA Amp 1.625207 0.163727 0.522159 0.251852
ENSG00000088038 CNOT3 UCEC Del 1.480619 0.057848 0.477699 0.115028
ENSG00000088038 CNOT3 OV Del 8.109886 0.281414 0.565794 0.457686