Ensembl ID ENSG00000071794 Gene ID 6596 Accession 11099
Gene Symbol HLTF Alias ZBU1;HLTF1;RNF80;HIP116;SNF2L3;HIP116A;SMARCA3 Full Name helicase like transcription factor
Position 3 : 149030127 - 149086554 Length 56428 bases Strand Minus strand
Status Confidence Main interacting RNAsN.A.RBP type Non-canonical_RBPs
Summary This gene encodes a member of the SWI/SNF family. Members of this family have helicase and ATPase activities and are thought to regulate transcription of certain genes by altering the chromatin structure around those genes. The encoded protein contains a RING finger DNA binding motif. Two transcript variants encoding the same protein have been found for this gene. However, use of an alternative translation start site produces an isoform that is truncated at the N-terminus compared to the full-length protein. [provided by RefSeq, Jul 2008]

ENSG00000071794 Expression In 33 Tumors

Ensembl ID Gene symbol Log2 Foldchange Pvaue Cancer
ENSG00000071794 HLTF -0.5 2.46e-14 KIRC
ENSG00000071794 HLTF 1.20 4.15e-15 HNSC
ENSG00000071794 HLTF 0.53 1.07e-14 BRCA
ENSG00000071794 HLTF 1.36 3.39e-31 LUSC
ENSG00000071794 HLTF 0.93 7.18e-21 LUAD
Ensembl ID Gene symbol Cancer types Pubmed ID
ENSG00000071794 HLTF colon cancer 11904375
ENSG00000071794 HLTF cancers 12584739
ENSG00000071794 HLTF gastric cancer 12766908
ENSG00000071794 HLTF tumor 12901794
ENSG00000071794 HLTF colonic cancers 15386372
ENSG00000071794 HLTF colorectal cancers 15793636
ENSG00000071794 HLTF cancer 16181380
ENSG00000071794 HLTF tumor 16331610
ENSG00000071794 HLTF tumor 16475210
ENSG00000071794 HLTF colorectal cancers 16475679
ENSG00000071794 HLTF gastric cancer 16497821
ENSG00000071794 HLTF colon cancer 16708352
ENSG00000071794 HLTF cancer 16762066
ENSG00000071794 HLTF tumor 17189406
ENSG00000071794 HLTF colorectal cancers 17201142
ENSG00000071794 HLTF tumor 17378912
ENSG00000071794 HLTF cervical cancer 17578348
ENSG00000071794 HLTF colorectal cancer 17657744
ENSG00000071794 HLTF cancer 18034322
ENSG00000071794 HLTF gastric cancers 18316726
ENSG00000071794 HLTF tumor 18825407
ENSG00000071794 HLTF colorectal cancer 19282772
ENSG00000071794 HLTF HNSCC 19614770
ENSG00000071794 HLTF cancer 19723507
ENSG00000071794 HLTF colorectal cancer 19773381
ENSG00000071794 HLTF tumor 19948885
ENSG00000071794 HLTF cancer 20388495
ENSG00000071794 HLTF cervical cancer 20535496
ENSG00000071794 HLTF colorectal cancer 20552891
ENSG00000071794 HLTF lung tumors 20849603
ENSG00000071794 HLTF colorectal cancers 21326223
ENSG00000071794 HLTF colorectal cancer 21479407
ENSG00000071794 HLTF tumor 21531217
ENSG00000071794 HLTF tumor 22362391
ENSG00000071794 HLTF colon cancers 22452792
ENSG00000071794 HLTF tumor 22766745
ENSG00000071794 HLTF bladder cancer 23485510
ENSG00000071794 HLTF tumor 23826137
ENSG00000071794 HLTF tumour 24198246
ENSG00000071794 HLTF bladder cancer 24577895
ENSG00000071794 HLTF tumors 24708595
ENSG00000071794 HLTF thyroid tumor 25005870
ENSG00000071794 HLTF tumors 25841351
ENSG00000071794 HLTF tumor 25906194
ENSG00000071794 HLTF tumour 26350214
ENSG00000071794 HLTF gallbladder cancer 26456195
ENSG00000071794 HLTF cancer 26472339
ENSG00000071794 HLTF tumor 26802049
ENSG00000071794 HLTF cancer 27308329
ENSG00000071794 HLTF tumors 27379156
ENSG00000071794 HLTF colorectal cancer 27844020
ENSG00000071794 HLTF tumor 28187169
ENSG00000071794 HLTF Tumor 28451061
ENSG00000071794 HLTF cancer 28954549
ENSG00000071794 HLTF cancer 28981387
ENSG00000071794 HLTF tumour 29038612
ENSG00000071794 HLTF colorectal cancer 29564023
ENSG00000071794 HLTF tumor 29661164
ENSG00000071794 HLTF cancers 29807746
ENSG00000071794 HLTF cancer 29955035
ENSG00000071794 HLTF tumor 29975766
ENSG00000071794 HLTF cancer 30232006
ENSG00000071794 HLTF colorectal cancer 30320371
ENSG00000071794 HLTF tumor 30528265
ENSG00000071794 HLTF colonic cancers 30657113
ENSG00000071794 HLTF acute myeloid leukemia (AML) 30696947
ENSG00000071794 HLTF tumor 31350889
ENSG00000071794 HLTF cancer 31429594
ENSG00000071794 HLTF colorectal tumors 31461471
Ensembl ID Gene symbol Disease/phenotype Mutation type Mutated / Total samples Literature
Ensembl ID Gene symbol Cancer P-value Which worse show
ENSG00000071794 HLTF UVM 0.014 low
ENSG00000071794 HLTF PAAD 0.044 low
ENSG00000071794 HLTF UCEC 0.0017 high
ENSG00000071794 HLTF THCA 0.0081 high
ENSG00000071794 HLTF ACC 0.044 high
ENSG00000071794 HLTF LUSC 0.043 high
ENSG00000071794 HLTF HNSC 0.0086 high
ENSG00000071794 HLTF KIRP 0.027 low
ENSG00000071794 HLTF PCPG 0.017 high
ENSG00000071794 HLTF THYM 0.05 high
ENSG00000071794 HLTF BRCA 0.04 high
ENSG00000071794 HLTF KIRC 0.032 low
ENSG00000071794 HLTF BLCA 0.023 low
ENSG00000071794 HLTF LAML 0.011 low
ENSG00000071794 HLTF SKCM 0.0014 low
ENSG00000071794 HLTF CESC 0.048 low
ENSG00000071794 HLTF LIHC 0.0021 high
Ensembl ID Gene symbol Cancer CNV type -log10(q-value) G-score average amplitude frequency
ENSG00000071794 HLTF LUSC Amp 43.540222 0.822602 0.940651 0.832335
ENSG00000071794 HLTF CESC Amp 11.139763 0.390470 0.966546 0.701695
ENSG00000071794 HLTF ESCA Amp 5.530083 0.497953 0.796147 0.603261
ENSG00000071794 HLTF HNSC Amp 21.046402 0.411499 0.726550 0.666667
ENSG00000071794 HLTF PCPG Del 1.375954 0.072845 0.629463 0.574074
ENSG00000071794 HLTF BRCA Amp 0.785514 0.147134 0.515857 0.275000
ENSG00000071794 HLTF PRAD Amp 1.557206 0.058026 0.432389 0.144309
ENSG00000071794 HLTF UCEC Amp 4.132854 0.169342 0.659149 0.233766
ENSG00000071794 HLTF OV Amp 18.306508 0.672732 0.863838 0.682211