Ensembl ID ENSG00000071794 Gene ID 6596 Accession 11099
Gene Symbol HLTF Alias ZBU1;HLTF1;RNF80;HIP116;SNF2L3;HIP116A;SMARCA3 Full Name helicase like transcription factor
Position 3 : 149030127 - 149086554 Length 56428 bases Strand Minus strand
Status Confidence Main interacting RNAsN.A.RBP type Non-canonical_RBPs
Summary This gene encodes a member of the SWI/SNF family. Members of this family have helicase and ATPase activities and are thought to regulate transcription of certain genes by altering the chromatin structure around those genes. The encoded protein contains a RING finger DNA binding motif. Two transcript variants encoding the same protein have been found for this gene. However, use of an alternative translation start site produces an isoform that is truncated at the N-terminus compared to the full-length protein. [provided by RefSeq, Jul 2008]

ENSG00000071794 Expression In 33 Tumors

Ensembl ID Gene symbol Log2 Foldchange Pvaue Cancer
ENSG00000071794 -0.5 2.46e-14 KIRC
ENSG00000071794 1.20 4.15e-15 HNSC
ENSG00000071794 0.53 1.07e-14 BRCA
ENSG00000071794 1.36 3.39e-31 LUSC
ENSG00000071794 0.93 7.18e-21 LUAD
Ensembl ID Gene symbol Cancer types Pubmed ID
ENSG00000071794 colon cancer 11904375
ENSG00000071794 cancers 12584739
ENSG00000071794 gastric cancer 12766908
ENSG00000071794 tumor 12901794
ENSG00000071794 colonic cancers 15386372
ENSG00000071794 colorectal cancers 15793636
ENSG00000071794 cancer 16181380
ENSG00000071794 tumor 16331610
ENSG00000071794 tumor 16475210
ENSG00000071794 colorectal cancers 16475679
ENSG00000071794 gastric cancer 16497821
ENSG00000071794 colon cancer 16708352
ENSG00000071794 cancer 16762066
ENSG00000071794 tumor 17189406
ENSG00000071794 colorectal cancers 17201142
ENSG00000071794 tumor 17378912
ENSG00000071794 cervical cancer 17578348
ENSG00000071794 colorectal cancer 17657744
ENSG00000071794 cancer 18034322
ENSG00000071794 gastric cancers 18316726
ENSG00000071794 tumor 18825407
ENSG00000071794 colorectal cancer 19282772
ENSG00000071794 HNSCC 19614770
ENSG00000071794 cancer 19723507
ENSG00000071794 colorectal cancer 19773381
ENSG00000071794 tumor 19948885
ENSG00000071794 cancer 20388495
ENSG00000071794 cervical cancer 20535496
ENSG00000071794 colorectal cancer 20552891
ENSG00000071794 lung tumors 20849603
ENSG00000071794 colorectal cancers 21326223
ENSG00000071794 colorectal cancer 21479407
ENSG00000071794 tumor 21531217
ENSG00000071794 tumor 22362391
ENSG00000071794 colon cancers 22452792
ENSG00000071794 tumor 22766745
ENSG00000071794 bladder cancer 23485510
ENSG00000071794 tumor 23826137
ENSG00000071794 tumour 24198246
ENSG00000071794 bladder cancer 24577895
ENSG00000071794 tumors 24708595
ENSG00000071794 thyroid tumor 25005870
ENSG00000071794 tumors 25841351
ENSG00000071794 tumor 25906194
ENSG00000071794 tumour 26350214
ENSG00000071794 gallbladder cancer 26456195
ENSG00000071794 cancer 26472339
ENSG00000071794 tumor 26802049
ENSG00000071794 cancer 27308329
ENSG00000071794 tumors 27379156
ENSG00000071794 colorectal cancer 27844020
ENSG00000071794 tumor 28187169
ENSG00000071794 Tumor 28451061
ENSG00000071794 cancer 28954549
ENSG00000071794 cancer 28981387
ENSG00000071794 tumour 29038612
ENSG00000071794 colorectal cancer 29564023
ENSG00000071794 tumor 29661164
ENSG00000071794 cancers 29807746
ENSG00000071794 cancer 29955035
ENSG00000071794 tumor 29975766
ENSG00000071794 cancer 30232006
ENSG00000071794 colorectal cancer 30320371
ENSG00000071794 tumor 30528265
ENSG00000071794 colonic cancers 30657113
ENSG00000071794 acute myeloid leukemia (AML) 30696947
ENSG00000071794 tumor 31350889
ENSG00000071794 cancer 31429594
ENSG00000071794 colorectal tumors 31461471
Ensembl ID Gene symbol Disease/phenotype Mutation type Mutated / Total samples Literature
Ensembl ID Gene symbol Cancer P-value Which worse show
ENSG00000071794 UVM 0.014 low
ENSG00000071794 PAAD 0.044 low
ENSG00000071794 UCEC 0.0017 high
ENSG00000071794 THCA 0.0081 high
ENSG00000071794 ACC 0.044 high
ENSG00000071794 LUSC 0.043 high
ENSG00000071794 HNSC 0.0086 high
ENSG00000071794 KIRP 0.027 low
ENSG00000071794 PCPG 0.017 high
ENSG00000071794 THYM 0.05 high
ENSG00000071794 BRCA 0.04 high
ENSG00000071794 KIRC 0.032 low
ENSG00000071794 BLCA 0.023 low
ENSG00000071794 LAML 0.011 low
ENSG00000071794 SKCM 0.0014 low
ENSG00000071794 CESC 0.048 low
ENSG00000071794 LIHC 0.0021 high
Ensembl ID Gene symbol Cancer CNV type -log10(q-value) G-score average amplitude frequency
ENSG00000071794 LUSC Amp 43.540222 0.822602 0.940651 0.832335
ENSG00000071794 CESC Amp 11.139763 0.390470 0.966546 0.701695
ENSG00000071794 ESCA Amp 5.530083 0.497953 0.796147 0.603261
ENSG00000071794 HNSC Amp 21.046402 0.411499 0.726550 0.666667
ENSG00000071794 PCPG Del 1.375954 0.072845 0.629463 0.574074
ENSG00000071794 BRCA Amp 0.785514 0.147134 0.515857 0.275000
ENSG00000071794 PRAD Amp 1.557206 0.058026 0.432389 0.144309
ENSG00000071794 UCEC Amp 4.132854 0.169342 0.659149 0.233766
ENSG00000071794 OV Amp 18.306508 0.672732 0.863838 0.682211