Ensembl ID ENSG00000006047 Gene ID 51087 Accession 17948
Gene Symbol YBX2 Alias DBPC;MSY2;CSDA3;CONTRIN Full Name Y-box binding protein 2
Position 17 : 7288263 - 7294639 Length 6377 bases Strand Minus strand
Status Confidence Main interacting RNAsmRNARBP type Canonical_RBPs
Summary This gene encodes a nucleic acid binding protein which is highly expressed in germ cells. The encoded protein binds to a Y-box element in the promoters of certain genes but also binds to mRNA transcribed from these genes. Pseudogenes for this gene are located on chromosome 10 and 15. [provided by RefSeq, Feb 2012]

ENSG00000006047 Expression In 33 Tumors

Ensembl ID Gene symbol Log2 Foldchange Pvaue Cancer
ENSG00000006047 YBX2 1.34 1.43e-11 KIRC
ENSG00000006047 YBX2 2.94 2.32e-20 KICH
ENSG00000006047 YBX2 4.54 4.31e-71 LUSC
ENSG00000006047 YBX2 4.75 1.48e-65 LUAD
Ensembl ID Gene symbol Cancer types Pubmed ID
ENSG00000006047 YBX2 cancer 16479255
ENSG00000006047 YBX2 germ cell tumor 16624424
ENSG00000006047 YBX2 cancer 27272809
ENSG00000006047 YBX2 tumor 28263985
Ensembl ID Gene symbol Disease/phenotype Mutation type Mutated / Total samples Literature
Ensembl ID Gene symbol Cancer P-value Which worse show
ENSG00000006047 YBX2 MESO 0.0027 low
ENSG00000006047 YBX2 SARC 0.049 low
ENSG00000006047 YBX2 STAD 0.021 low
ENSG00000006047 YBX2 LGG 0.0089 low
ENSG00000006047 YBX2 HNSC 0.0059 low
ENSG00000006047 YBX2 KIRP 0.0035 low
ENSG00000006047 YBX2 BRCA 0.014 high
ENSG00000006047 YBX2 UCS 0.032 high
ENSG00000006047 YBX2 ESCA 0.00045 high
ENSG00000006047 YBX2 BLCA 0.0064 low
ENSG00000006047 YBX2 LAML 0.0066 low
ENSG00000006047 YBX2 GBM 0.00093 high
ENSG00000006047 YBX2 SKCM 0.034 high
ENSG00000006047 YBX2 CESC 0.0064 low
Ensembl ID Gene symbol Cancer CNV type -log10(q-value) G-score average amplitude frequency
ENSG00000006047 YBX2 SARC Del 14.859602 0.355126 0.596399 0.435798
ENSG00000006047 YBX2 GBM Del 1.899792 0.066235 0.479530 0.155979
ENSG00000006047 YBX2 LIHC Del 8.498972 0.153912 0.661838 0.597297
ENSG00000006047 YBX2 BRCA Del 2.029241 0.074783 0.490331 0.607407
ENSG00000006047 YBX2 PRAD Del 27.587294 0.239415 0.553617 0.313008