Ensembl ID
ENSG00000006047
Gene ID
51087
Accession
17948
Gene Symbol
YBX2
Alias
DBPC;MSY2;CSDA3;CONTRIN
Full Name
Y-box binding protein 2
Position
17 : 7288263 - 7294639
Length
6377 bases
Strand
Minus strand
Status
Confidence
Main interacting RNAs mRNA RBP type
Canonical_RBPs
Summary
This gene encodes a nucleic acid binding protein which is highly expressed in germ cells. The encoded protein binds to a Y-box element in the promoters of certain genes but also binds to mRNA transcribed from these genes. Pseudogenes for this gene are located on chromosome 10 and 15. [provided by RefSeq, Feb 2012]
ENSG00000006047 Expression In 33 Tumors
Ensembl ID
Gene symbol
Log2 Foldchange
Pvaue
Cancer
ENSG00000006047
YBX2
1.34
1.43e-11
KIRC
ENSG00000006047
YBX2
2.94
2.32e-20
KICH
ENSG00000006047
YBX2
4.54
4.31e-71
LUSC
ENSG00000006047
YBX2
4.75
1.48e-65
LUAD
Ensembl ID
Gene symbol
Cancer types
Pubmed ID
ENSG00000006047
YBX2
cancer
16479255
ENSG00000006047
YBX2
germ cell tumor
16624424
ENSG00000006047
YBX2
cancer
27272809
ENSG00000006047
YBX2
tumor
28263985
Ensembl ID
Gene symbol
Disease/phenotype
Mutation type
Mutated / Total samples
Literature
Ensembl ID
Gene symbol
Cancer
P-value
Which worse
show
ENSG00000006047
YBX2
MESO
0.0027
low
show
ENSG00000006047
YBX2
SARC
0.049
low
show
ENSG00000006047
YBX2
STAD
0.021
low
show
ENSG00000006047
YBX2
LGG
0.0089
low
show
ENSG00000006047
YBX2
HNSC
0.0059
low
show
ENSG00000006047
YBX2
KIRP
0.0035
low
show
ENSG00000006047
YBX2
BRCA
0.014
high
show
ENSG00000006047
YBX2
UCS
0.032
high
show
ENSG00000006047
YBX2
ESCA
0.00045
high
show
ENSG00000006047
YBX2
BLCA
0.0064
low
show
ENSG00000006047
YBX2
LAML
0.0066
low
show
ENSG00000006047
YBX2
GBM
0.00093
high
show
ENSG00000006047
YBX2
SKCM
0.034
high
show
ENSG00000006047
YBX2
CESC
0.0064
low
show
Ensembl ID
Gene symbol
Cancer
CNV type
-log10(q-value)
G-score
average amplitude
frequency
ENSG00000006047
YBX2
SARC
Del
14.859602
0.355126
0.596399
0.435798
ENSG00000006047
YBX2
GBM
Del
1.899792
0.066235
0.479530
0.155979
ENSG00000006047
YBX2
LIHC
Del
8.498972
0.153912
0.661838
0.597297
ENSG00000006047
YBX2
BRCA
Del
2.029241
0.074783
0.490331
0.607407
ENSG00000006047
YBX2
PRAD
Del
27.587294
0.239415
0.553617
0.313008
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